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Pairwise 3D Alignment |
Calculation of a structural alignment for two chains |
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Self 3D Alignment |
Detection of structurally similar regions in one chain |
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Multiple 3D Alignment |
Calculation of multiple structural alignment for 3-10 chains |
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3D Library Search |
Comparison of one structure vs library structures. The library is weekly updated. |
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PDB information |
Show information about each PDB entry |
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Sequence Search vs PDB |
Comparison of amino acid sequence vs library 3D structures. Simple 3D structure prediciton. |
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Help page |
Kawabata T., Nishikawa.K. "Protein tertiary structure comparison using the Markov transition model of evolution" (2000). Proteins, vol 41, 108-122 [MEDLINE]
Comments and Questions to :
Lab.for Protein Informatics,Osaka University
LastModified: May 11, 2011